Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat pathway signal sequence domain protein | HMPREF3212_03328 | Not Available | Positive | 3250958 - 3252850 | 70126.3 |
| cytochrome | HMPREF3212_03329 | Not Available | Positive | 3252854 - 3254062 | 43238.7 |
| transcriptional regulator, gntr family | HMPREF3212_03330 | Not Available | Negative | 3254106 - 3255581 | 54992.2 |
| 4-aminobutyrate transaminase | HMPREF3212_03331 | Not Available | Positive | 3255688 - 3256950 | 44666.6 |
| tonb-dependent siderophore receptor | HMPREF3212_03332 | Not Available | Positive | 3257164 - 3259296 | 77424.8 |
| periplasmic binding protein | HMPREF3212_03333 | Not Available | Positive | 3259306 - 3260316 | 37257.4 |
| periplasmic binding protein | HMPREF3212_03334 | Not Available | Positive | 3260514 - 3261530 | 37787.4 |
| iron chelate uptake abc transporter, fect family, permease protein | HMPREF3212_03335 | Not Available | Positive | 3261517 - 3262521 | 35837.1 |
| abc transporter, atp-binding protein | HMPREF3212_03336 | Not Available | Positive | 3262518 - 3263270 | 27095.9 |
| molybdate abc transporter, periplasmic molybdate-binding protein | HMPREF3212_03337 | Not Available | Negative | 3263257 - 3263979 | 26310.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

