Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, permease protein | HMPREF3212_03318 | Not Available | Negative | 3242569 - 3243354 | 28921.6 |
| glutamine abc transporter, atp-binding protein glnq | HMPREF3212_03319 | Not Available | Negative | 3243354 - 3244172 | 29899.0 |
| abc transporter, substrate-binding protein, family 3 | HMPREF3212_03320 | Not Available | Negative | 3244174 - 3245007 | 29499.7 |
| hypothetical protein | HMPREF3212_03321 | Not Available | Negative | 3245217 - 3245360 | 5299.1 |
| hypothetical protein | HMPREF3212_03322 | Not Available | Positive | 3245432 - 3245596 | 6315.87 |
| amino acid permease | HMPREF3212_03323 | Not Available | Positive | 3245690 - 3247171 | 53688.4 |
| hypothetical protein | HMPREF3212_03324 | Not Available | Negative | 3247193 - 3247891 | 26178.7 |
| transcriptional regulator, gntr family | HMPREF3212_03325 | Not Available | Negative | 3247916 - 3248641 | 26636.1 |
| putative aminobutyraldehyde dehydrogenase | HMPREF3212_03326 | Not Available | Positive | 3248957 - 3250384 | 51229.8 |
| snoal-like polyketide cyclase | HMPREF3212_03327 | Not Available | Positive | 3250396 - 3250869 | 17403.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

