Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s metabolism associated domain protein | HMPREF3212_03288 | Not Available | Positive | 3213405 - 3213821 | 15707.1 |
| putative protein erfk/srfk | HMPREF3212_03289 | Not Available | Positive | 3213945 - 3214949 | 36157.7 |
| murein-lipoprotein | HMPREF3212_03290 | Not Available | Negative | 3215017 - 3215256 | 8461.04 |
| murein-lipoprotein | HMPREF3212_03291 | Not Available | Negative | 3215338 - 3215574 | 8334.87 |
| pyruvate kinase | HMPREF3212_03292 | Not Available | Negative | 3215884 - 3217296 | 50646.4 |
| amino acid permease | HMPREF3212_03293 | Not Available | Negative | 3217711 - 3219054 | 48662.9 |
| hypothetical protein | HMPREF3212_03294 | Not Available | Negative | 3219075 - 3219632 | 20530.4 |
| hypothetical protein | HMPREF3212_03295 | Not Available | Negative | 3220030 - 3220767 | 27870.6 |
| putative ribokinase | HMPREF3212_03296 | Not Available | Negative | 3220780 - 3222006 | 44285.2 |
| abc transporter, atp-binding protein | HMPREF3212_03297 | Not Available | Positive | 3222501 - 3223523 | 37439.4 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

