Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l35 | HMPREF3212_03236 | Not Available | Positive | 3165098 - 3165295 | 7221.25 |
| ribosomal protein l20 | HMPREF3212_03237 | Not Available | Positive | 3165351 - 3165707 | 13455.7 |
| hypothetical protein | HMPREF3212_03238 | Not Available | Negative | 3165773 - 3165961 | 6938.49 |
| phenylalanine--trna ligase, alpha subunit | HMPREF3212_03239 | Not Available | Positive | 3166077 - 3167060 | 36961.0 |
| phenylalanine--trna ligase, beta subunit | HMPREF3212_03240 | Not Available | Positive | 3167076 - 3169463 | 87127.9 |
| integration host factor, alpha subunit | HMPREF3212_03241 | Not Available | Positive | 3169468 - 3169767 | 11382.6 |
| vitamin b12 import system permease protein btuc | HMPREF3212_03242 | Not Available | Positive | 3169912 - 3170901 | 35322.8 |
| glutathione peroxidase | HMPREF3212_03243 | Not Available | Positive | 3170962 - 3171513 | 20441.3 |
| abc transporter, atp-binding protein | HMPREF3212_03244 | Not Available | Positive | 3171513 - 3172262 | 27128.0 |
| nlpc/p60 family protein | HMPREF3212_03245 | Not Available | Positive | 3172340 - 3172804 | 17332.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

