Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinylornithine transaminase | HMPREF3212_03206 | Not Available | Positive | 3135763 - 3136983 | 43539.0 |
| arginine n-succinyltransferase | HMPREF3212_03207 | Not Available | Positive | 3136980 - 3138014 | 38424.0 |
| succinylglutamate-semialdehyde dehydrogenase | HMPREF3212_03208 | Not Available | Positive | 3138011 - 3139489 | 52839.9 |
| succinylarginine dihydrolase | HMPREF3212_03209 | Not Available | Positive | 3139486 - 3140829 | 49624.9 |
| succinylglutamate desuccinylase | HMPREF3212_03210 | Not Available | Positive | 3140822 - 3141787 | 35772.7 |
| spheroplast protein y | HMPREF3212_03211 | Not Available | Positive | 3142137 - 3142622 | 18225.1 |
| hypothetical protein | HMPREF3212_03212 | Not Available | Positive | 3142973 - 3143551 | 21595.8 |
| endonuclease cho | HMPREF3212_03213 | Not Available | Negative | 3143511 - 3144398 | 33294.4 |
| nad+ synthase | HMPREF3212_03214 | Not Available | Negative | 3144530 - 3145360 | 30471.3 |
| smpa / omla family protein | HMPREF3212_03215 | Not Available | Positive | 3145561 - 3145902 | 12161.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

