Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase, alpha subunit | HMPREF3212_03156 | Not Available | Negative | 3086183 - 3088393 | 82142.3 |
| hypothetical protein | HMPREF3212_03157 | Not Available | Positive | 3088497 - 3088619 | 4738.7 |
| transglycosylase associated protein | HMPREF3212_03158 | Not Available | Positive | 3088691 - 3088939 | 8663.06 |
| hypothetical protein | HMPREF3212_03159 | Not Available | Negative | 3088936 - 3089094 | 5836.91 |
| diguanylate cyclase domain protein | HMPREF3212_03160 | Not Available | Negative | 3089212 - 3090237 | 38595.2 |
| hypothetical protein | HMPREF3212_03161 | Not Available | Positive | 3090424 - 3090672 | 8650.6 |
| hypothetical protein | HMPREF3212_03162 | Not Available | Negative | 3090680 - 3091027 | 13463.0 |
| ctp synthase domain protein | HMPREF3212_03163 | Not Available | Positive | 3091205 - 3091912 | 25640.4 |
| cyanate transporter | HMPREF3212_03164 | Not Available | Negative | 3091949 - 3093136 | 41010.5 |
| transcriptional regulator, arac family | HMPREF3212_03165 | Not Available | Positive | 3093236 - 3094054 | 30607.4 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

