Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter, permease protein potb | HMPREF3212_03116 | Not Available | Negative | 3052021 - 3052878 | 32232.3 |
| spermidine/putrescine abc transporter, atp-binding protein pota | HMPREF3212_03117 | Not Available | Negative | 3052862 - 3053998 | 42953.6 |
| peptidase t | HMPREF3212_03118 | Not Available | Positive | 3054249 - 3055475 | 44736.8 |
| cupin family protein | HMPREF3212_03119 | Not Available | Negative | 3055578 - 3056708 | 43059.9 |
| virulence sensor histidine kinase phoq | HMPREF3212_03120 | Not Available | Negative | 3056792 - 3058255 | 55303.6 |
| transcriptional regulatory protein phop | HMPREF3212_03121 | Not Available | Negative | 3058255 - 3058929 | 25642.9 |
| adenylosuccinate lyase | HMPREF3212_03122 | Not Available | Negative | 3059091 - 3060461 | 51571.6 |
| hypothetical protein | HMPREF3212_03123 | Not Available | Negative | 3060465 - 3061112 | 23115.2 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | HMPREF3212_03124 | Not Available | Negative | 3061141 - 3062292 | 42616.9 |
| phosphatase nudj | HMPREF3212_03125 | Not Available | Negative | 3062301 - 3062762 | 17418.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

