Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein erfk/srfk | HMPREF3212_03106 | Not Available | Negative | 3039090 - 3040061 | 34899.2 |
| transcription-repair coupling factor | HMPREF3212_03107 | Not Available | Negative | 3040205 - 3043651 | 129854.0 |
| acyltransferase | HMPREF3212_03108 | Not Available | Negative | 3043770 - 3044873 | 41664.1 |
| lipoprotein-releasing system transmembrane protein lolc | HMPREF3212_03109 | Not Available | Positive | 3045096 - 3046295 | 43293.8 |
| lipoprotein releasing system, atp-binding protein | HMPREF3212_03110 | Not Available | Positive | 3046288 - 3046989 | 25433.8 |
| lipoprotein releasing system, transmembrane protein lole | HMPREF3212_03111 | Not Available | Positive | 3047052 - 3048233 | 42834.6 |
| n-acetyl-d-glucosamine kinase | HMPREF3212_03112 | Not Available | Positive | 3048293 - 3049234 | 34206.9 |
| transcriptional regulator, sir2 family | HMPREF3212_03113 | Not Available | Positive | 3049361 - 3050071 | 26315.4 |
| spermidine/putrescine abc transporter, periplasmic spermidine/putrescine-binding protein potd | HMPREF3212_03114 | Not Available | Negative | 3050171 - 3051220 | 39100.3 |
| spermidine/putrescine abc transporter, permease protein potc | HMPREF3212_03115 | Not Available | Negative | 3051245 - 3052024 | 28526.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

