Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel-dependent hydrogenase b-type cytochrome subunit | HMPREF3212_03005 | Not Available | Negative | 2948657 - 2949223 | 20671.5 |
| hypothetical protein | HMPREF3212_03006 | Not Available | Negative | 2949487 - 2949645 | 6361.26 |
| n-methyl-l-tryptophan oxidase | HMPREF3212_03007 | Not Available | Negative | 2949656 - 2950771 | 40515.8 |
| biofilm formation regulatory protein bsss | HMPREF3212_03008 | Not Available | Negative | 2950886 - 2951143 | 9762.44 |
| dna-damage-inducible protein i | HMPREF3212_03009 | Not Available | Negative | 2951481 - 2951726 | 9008.48 |
| dihydroorotase, homodimeric type | HMPREF3212_03010 | Not Available | Negative | 2951792 - 2952838 | 38900.8 |
| hypothetical protein | HMPREF3212_03011 | Not Available | Negative | 2952944 - 2953519 | 21057.7 |
| multidrug resistance protein mdth | HMPREF3212_03012 | Not Available | Negative | 2953619 - 2954827 | 44197.9 |
| hypothetical protein | HMPREF3212_03013 | Not Available | Negative | 2954884 - 2955015 | 4933.03 |
| ribosomal-protein-alanine acetyltransferase | HMPREF3212_03014 | Not Available | Positive | 2955087 - 2955671 | 22780.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

