Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curli production assembly/transport component csgg | HMPREF3212_02985 | Not Available | Negative | 2929194 - 2930027 | 30530.0 |
| putative curli production assembly/transport component csgf | HMPREF3212_02986 | Not Available | Negative | 2930053 - 2930466 | 14851.5 |
| putative curli production assembly/transport component csge | HMPREF3212_02987 | Not Available | Negative | 2930492 - 2930908 | 15605.4 |
| transcriptional regulator, luxr family | HMPREF3212_02988 | Not Available | Negative | 2930889 - 2931539 | 24877.8 |
| minor curlin subunit csgb | HMPREF3212_02989 | Not Available | Positive | 2932274 - 2932759 | 17201.2 |
| major curlin subunit csga | HMPREF3212_02990 | Not Available | Positive | 2932800 - 2933249 | 15233.4 |
| curli assembly protein csgc family protein | HMPREF3212_02991 | Not Available | Positive | 2933308 - 2933643 | 12201.7 |
| hypothetical protein | HMPREF3212_02992 | Not Available | Positive | 2933865 - 2934116 | 9379.22 |
| macro domain protein | HMPREF3212_02993 | Not Available | Positive | 2934217 - 2934759 | 19241.0 |
| phospholipase d domain protein | HMPREF3212_02994 | Not Available | Positive | 2934743 - 2936182 | 54487.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

