Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integral membrane protein, yccs/yhfk family | HMPREF3212_02955 | Not Available | Negative | 2904428 - 2906515 | 79329.7 |
| catabolite protein activator | HMPREF3212_02956 | Not Available | Negative | 2906567 - 2907199 | 23657.9 |
| osmc-like protein | HMPREF3212_02957 | Not Available | Positive | 2907506 - 2907910 | 14478.4 |
| phosphoribulokinase/uridine kinase family protein | HMPREF3212_02958 | Not Available | Negative | 2908009 - 2908878 | 32401.9 |
| hypothetical protein | HMPREF3212_02959 | Not Available | Negative | 2908932 - 2909150 | 8369.9 |
| hydrolase, alpha/beta domain protein | HMPREF3212_02960 | Not Available | Negative | 2909147 - 2910169 | 38597.3 |
| hydrolase, nudix family | HMPREF3212_02961 | Not Available | Negative | 2910251 - 2910970 | 27190.4 |
| hypothetical protein | HMPREF3212_02962 | Not Available | Positive | 2910983 - 2911102 | 4324.43 |
| ribose-phosphate diphosphokinase | HMPREF3212_02963 | Not Available | Positive | 2911162 - 2912022 | 30980.4 |
| nicotinate phosphoribosyltransferase, (naprtase) family | HMPREF3212_02964 | Not Available | Positive | 2912037 - 2913527 | 56711.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

