Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_02925 | Not Available | Positive | 2879133 - 2879261 | 4613.75 |
| shikimate kinase | HMPREF3212_02926 | Not Available | Positive | 2879450 - 2879971 | 19489.1 |
| 3-dehydroquinate synthase | HMPREF3212_02927 | Not Available | Positive | 2880029 - 2881117 | 38991.3 |
| protein damx | HMPREF3212_02928 | Not Available | Positive | 2881214 - 2882515 | 46299.4 |
| dna adenine methylase | HMPREF3212_02929 | Not Available | Positive | 2882633 - 2883469 | 32168.2 |
| ribulose-phosphate 3-epimerase | HMPREF3212_02930 | Not Available | Positive | 2883487 - 2884164 | 24621.8 |
| phosphoglycolate phosphatase, bacterial | HMPREF3212_02931 | Not Available | Positive | 2884157 - 2884915 | 27318.6 |
| tryptophan--trna ligase | HMPREF3212_02932 | Not Available | Positive | 2884908 - 2885912 | 37458.9 |
| hypothetical protein | HMPREF3212_02933 | Not Available | Positive | 2886078 - 2886983 | 33364.3 |
| hypothetical protein | HMPREF3212_02934 | Not Available | Positive | 2886984 - 2887361 | 14109.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

