Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein 15 | HMPREF3212_02915 | Not Available | Negative | 2868780 - 2869181 | 15514.7 |
| had hydrolase, family ia, variant 3 | HMPREF3212_02916 | Not Available | Negative | 2869192 - 2869860 | 25291.0 |
| intracellular growth attenuator protein igaa | HMPREF3212_02917 | Not Available | Negative | 2869923 - 2872058 | 79175.9 |
| adp compounds hydrolase nude | HMPREF3212_02918 | Not Available | Positive | 2872381 - 2872941 | 21190.6 |
| penicillin-binding protein 1a | HMPREF3212_02919 | Not Available | Negative | 2873062 - 2875638 | 94033.0 |
| hypothetical protein | HMPREF3212_02920 | Not Available | Positive | 2875735 - 2876514 | 29141.1 |
| fimbrial assembly protein piln | HMPREF3212_02921 | Not Available | Positive | 2876514 - 2877053 | 20790.2 |
| hypothetical protein | HMPREF3212_02922 | Not Available | Positive | 2877106 - 2877492 | 14359.6 |
| hypothetical protein | HMPREF3212_02923 | Not Available | Positive | 2877482 - 2877895 | 15650.7 |
| type iv pilus secretin pilq | HMPREF3212_02924 | Not Available | Positive | 2877876 - 2879045 | 42451.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

