Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase, nad-binding domain protein | HMPREF3212_02875 | Not Available | Positive | 2820593 - 2821630 | 38786.0 |
| pirin family protein | HMPREF3212_02876 | Not Available | Positive | 2821754 - 2822449 | 26248.8 |
| hth-type transcriptional regulator gntr | HMPREF3212_02877 | Not Available | Positive | 2822671 - 2823666 | 36490.3 |
| shikimate kinase | HMPREF3212_02878 | Not Available | Positive | 2823847 - 2824338 | 17923.4 |
| low-affinity gluconate transporter | HMPREF3212_02879 | Not Available | Positive | 2824401 - 2825678 | 44208.0 |
| hypothetical protein | HMPREF3212_02880 | Not Available | Negative | 2825774 - 2826220 | 16578.1 |
| hypothetical protein | HMPREF3212_02882 | Not Available | Negative | 2826881 - 2827012 | 5211.19 |
| hypothetical protein | HMPREF3212_02881 | Not Available | Positive | 2827011 - 2827199 | 6920.26 |
| membrane protein, marc family | HMPREF3212_02883 | Not Available | Negative | 2827350 - 2827943 | 21581.0 |
| hypothetical protein | HMPREF3212_02884 | Not Available | Negative | 2827940 - 2828101 | 5905.14 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

