Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system, toxin component, hica family | HMPREF3212_02824 | Not Available | Positive | 2781394 - 2781669 | 10211.4 |
| toxin-antitoxin system, antitoxin component, hicb family | HMPREF3212_02825 | Not Available | Positive | 2781666 - 2782025 | 13199.7 |
| nickel-responsive transcriptional regulator nikr | HMPREF3212_02826 | Not Available | Negative | 2782138 - 2782539 | 15109.7 |
| 4'-phosphopantetheinyl transferase family protein | HMPREF3212_02827 | Not Available | Negative | 2782589 - 2783167 | 21015.1 |
| putative autoinducer 2 exporter tqsa | HMPREF3212_02829 | Not Available | Negative | 2783230 - 2784414 | 43446.6 |
| transporter, major facilitator family protein | HMPREF3212_02828 | Not Available | Positive | 2784413 - 2785630 | 42152.1 |
| protein dcrb | HMPREF3212_02830 | Not Available | Negative | 2785634 - 2786191 | 19604.3 |
| putative membrane protein | HMPREF3212_02831 | Not Available | Negative | 2786264 - 2786983 | 27486.2 |
| sulfur transfer protein sira | HMPREF3212_02832 | Not Available | Positive | 2787083 - 2787343 | 9699.71 |
| cadmium-exporting atpase | HMPREF3212_02833 | Not Available | Negative | 2787437 - 2789467 | 71149.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

