Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha,alpha-trehalase | HMPREF3212_02804 | Not Available | Negative | 2757259 - 2758908 | 63486.6 |
| di-heme cytochrome c peroxidase | HMPREF3212_02805 | Not Available | Positive | 2759336 - 2760730 | 51430.1 |
| hypothetical protein | HMPREF3212_02806 | Not Available | Negative | 2760954 - 2761085 | 4641.4 |
| glutathione-disulfide reductase | HMPREF3212_02807 | Not Available | Negative | 2761263 - 2762615 | 48727.4 |
| hypothetical protein | HMPREF3212_02808 | Not Available | Negative | 2762720 - 2763562 | 32029.4 |
| oligopeptidase a | HMPREF3212_02809 | Not Available | Positive | 2763771 - 2765813 | 77177.3 |
| hypothetical protein | HMPREF3212_02810 | Not Available | Positive | 2765948 - 2766706 | 27183.0 |
| pyridine nucleotide-disulfide oxidoreductase | HMPREF3212_02811 | Not Available | Negative | 2766798 - 2767997 | 43308.6 |
| transcriptional regulator, rrf2 family | HMPREF3212_02812 | Not Available | Positive | 2768230 - 2768733 | 18857.8 |
| amino acid/peptide transporter | HMPREF3212_02814 | Not Available | Negative | 2768782 - 2770254 | 53598.3 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

