Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygluconokinase | HMPREF3212_02764 | Not Available | Negative | 2714686 - 2715624 | 33286.8 |
| ap endonuclease, family 2 | HMPREF3212_02765 | Not Available | Negative | 2715628 - 2716377 | 27485.9 |
| putative hth-type transcriptional regulator kdgr | HMPREF3212_02766 | Not Available | Negative | 2716477 - 2717493 | 37052.6 |
| ompa family protein | HMPREF3212_02767 | Not Available | Negative | 2717635 - 2718297 | 22324.7 |
| dimethyl sulfoxide reductase | HMPREF3212_02768 | Not Available | Positive | 2718637 - 2720790 | 79213.5 |
| acetyltransferase, gnat family | HMPREF3212_02769 | Not Available | Negative | 2720759 - 2721199 | 16883.9 |
| dna-3-methyladenine glycosylase 1 | HMPREF3212_02770 | Not Available | Negative | 2721189 - 2721758 | 21290.3 |
| hypothetical protein | HMPREF3212_02771 | Not Available | Positive | 2721916 - 2722617 | 25651.6 |
| oxalate/formate antiporter | HMPREF3212_02772 | Not Available | Positive | 2722869 - 2724071 | 42742.9 |
| arylsulfatase | HMPREF3212_02773 | Not Available | Positive | 2724285 - 2725979 | 64535.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

