Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase, class i/ii | HMPREF3212_02744 | Not Available | Negative | 2695188 - 2696492 | 48692.2 |
| periplasmic alpha-amylase | HMPREF3212_02745 | Not Available | Negative | 2696615 - 2698645 | 75361.1 |
| hypothetical protein | HMPREF3212_02746 | Not Available | Negative | 2698757 - 2698978 | 8481.61 |
| mannosyl-glycoprotein endo-beta-n-acetylglucosaminidase | HMPREF3212_02747 | Not Available | Positive | 2698995 - 2699786 | 29635.6 |
| transcriptional regulator, arac family | HMPREF3212_02748 | Not Available | Negative | 2699831 - 2701009 | 44695.3 |
| hypothetical protein | HMPREF3212_02749 | Not Available | Positive | 2701140 - 2701283 | 5419.04 |
| xylose isomerase | HMPREF3212_02750 | Not Available | Positive | 2701359 - 2702693 | 50077.2 |
| xylulokinase | HMPREF3212_02751 | Not Available | Positive | 2702765 - 2704219 | 52536.2 |
| yiaa/b two helix domain protein | HMPREF3212_02752 | Not Available | Positive | 2704366 - 2704740 | 13941.7 |
| acyltransferase | HMPREF3212_02753 | Not Available | Negative | 2704737 - 2705750 | 38144.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

