Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase | HMPREF3212_02674 | Not Available | Negative | 2630118 - 2631341 | 43498.6 |
| dna repair protein radc | HMPREF3212_02675 | Not Available | Positive | 2631510 - 2632175 | 24999.5 |
| ribosomal protein l28 | HMPREF3212_02676 | Not Available | Positive | 2632430 - 2632630 | 7725.4 |
| ribosomal protein l33 | HMPREF3212_02677 | Not Available | Positive | 2632651 - 2632818 | 6371.94 |
| dna-formamidopyrimidine glycosylase | HMPREF3212_02678 | Not Available | Positive | 2632917 - 2633726 | 30220.6 |
| pantetheine-phosphate adenylyltransferase | HMPREF3212_02679 | Not Available | Negative | 2633765 - 2634244 | 17945.8 |
| 3-deoxy-d-manno-octulosonic-acid transferase | HMPREF3212_02680 | Not Available | Negative | 2634253 - 2635530 | 47297.8 |
| hypothetical protein | HMPREF3212_02681 | Not Available | Positive | 2635550 - 2635690 | 5624.71 |
| hypothetical protein | HMPREF3212_02682 | Not Available | Positive | 2635662 - 2635799 | 5376.88 |
| rfag glucosyltransferase i | HMPREF3212_02683 | Not Available | Positive | 2635955 - 2637079 | 42481.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

