Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanosine 3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | HMPREF3212_02664 | Not Available | Negative | 2620573 - 2622687 | 79478.3 |
| dna-directed rna polymerase, omega subunit | HMPREF3212_02665 | Not Available | Negative | 2622706 - 2622981 | 10237.2 |
| guanylate kinase | HMPREF3212_02666 | Not Available | Negative | 2623036 - 2623659 | 23465.9 |
| nad-dependent dna ligase ob-fold domain protein | HMPREF3212_02667 | Not Available | Positive | 2623759 - 2625600 | 68887.6 |
| hypothetical protein | HMPREF3212_02668 | Not Available | Negative | 2625597 - 2626214 | 22086.0 |
| tigr00255 family protein | HMPREF3212_02669 | Not Available | Negative | 2626474 - 2627337 | 33122.8 |
| trna nucleotidyltransferase | HMPREF3212_02670 | Not Available | Positive | 2627358 - 2628179 | 29258.1 |
| orotate phosphoribosyltransferase | HMPREF3212_02671 | Not Available | Positive | 2628230 - 2628886 | 24075.9 |
| hth-type protein slma | HMPREF3212_02672 | Not Available | Negative | 2628969 - 2629565 | 22865.8 |
| dutp diphosphatase | HMPREF3212_02673 | Not Available | Negative | 2629682 - 2630140 | 16226.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

