Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system, antitoxin component, phd domain protein | HMPREF3212_02645 | Not Available | Negative | 2601009 - 2601185 | 6758.88 |
| hypothetical protein | HMPREF3212_02646 | Not Available | Negative | 2601303 - 2601593 | 10756.8 |
| hypothetical protein | HMPREF3212_02647 | Not Available | Positive | 2601730 - 2601924 | 7069.53 |
| hypothetical protein | HMPREF3212_02648 | Not Available | Negative | 2601933 - 2602499 | 21048.4 |
| Trna-sec(p) | Not Available | Not Available | Positive | 2602599 - 2602689 | Not Available |
| glycoside/pentoside/hexuronide transporter | HMPREF3212_02649 | Not Available | Positive | 2602980 - 2604362 | 50623.0 |
| glycosyl hydrolase, family 31 | HMPREF3212_02650 | Not Available | Positive | 2604370 - 2606691 | 88227.6 |
| hypothetical protein | HMPREF3212_02651 | Not Available | Positive | 2606694 - 2606909 | 7793.69 |
| prd domain protein | HMPREF3212_02652 | Not Available | Positive | 2607014 - 2608567 | 58462.5 |
| phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 | HMPREF3212_02653 | Not Available | Positive | 2608594 - 2609064 | 17413.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

