Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | HMPREF3212_02635 | Not Available | Negative | 2590603 - 2590908 | 11397.9 |
| zinc-binding alcohol dehydrogenase family protein | HMPREF3212_02636 | Not Available | Negative | 2590910 - 2591917 | 36152.4 |
| lysr substrate binding domain protein | HMPREF3212_02637 | Not Available | Positive | 2592022 - 2592924 | 33738.6 |
| peptidase, c69 family | HMPREF3212_02638 | Not Available | Negative | 2592961 - 2594499 | 57675.2 |
| hypothetical protein | HMPREF3212_02639 | Not Available | Negative | 2594800 - 2595264 | 17469.0 |
| transcriptional regulatory protein | HMPREF3212_02640 | Not Available | Negative | 2595264 - 2596121 | 32780.5 |
| hypothetical protein | HMPREF3212_02642 | Not Available | Negative | 2596668 - 2596892 | 8370.31 |
| hypothetical protein | HMPREF3212_02641 | Not Available | Positive | 2596887 - 2597228 | 13205.2 |
| outer membrane autotransporter barrel domain protein | HMPREF3212_02643 | Not Available | Positive | 2597363 - 2600113 | 97190.9 |
| hypothetical protein | HMPREF3212_02644 | Not Available | Negative | 2600229 - 2600603 | 13641.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

