Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system fructose iia component | HMPREF3212_02625 | Not Available | Positive | 2583145 - 2583489 | 12188.8 |
| pts system sorbose subfamily iib component | HMPREF3212_02626 | Not Available | Positive | 2583502 - 2583987 | 17615.3 |
| pts system sorbose-specific iic component | HMPREF3212_02627 | Not Available | Positive | 2584013 - 2584762 | 26773.9 |
| pts system mannose/fructose/sorbose family iid component | HMPREF3212_02628 | Not Available | Positive | 2584759 - 2585619 | 30836.5 |
| putative pyridoxal phosphate-dependent enzyme | HMPREF3212_02629 | Not Available | Positive | 2585623 - 2586732 | 39475.4 |
| ef_0839/aha_3917 family protein | HMPREF3212_02630 | Not Available | Positive | 2586719 - 2587462 | 25950.3 |
| hypothetical protein | HMPREF3212_02631 | Not Available | Negative | 2587569 - 2587703 | 4950.82 |
| hypothetical protein | HMPREF3212_02632 | Not Available | Positive | 2587710 - 2588612 | 34119.1 |
| d-methionine-binding lipoprotein metq | HMPREF3212_02633 | Not Available | Positive | 2588736 - 2589554 | 29444.3 |
| carboxylate/amino acid/amine transporter | HMPREF3212_02634 | Not Available | Negative | 2589583 - 2590464 | 31497.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

