Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein regulates uhpt expression | HMPREF3212_02615 | Not Available | Positive | 2572095 - 2573423 | 48520.5 |
| sugar phosphate antiporter | HMPREF3212_02616 | Not Available | Positive | 2573566 - 2574957 | 50768.7 |
| hypothetical protein | HMPREF3212_02617 | Not Available | Positive | 2575071 - 2575535 | 17935.0 |
| toxin-antitoxin system, toxin component, rele family | HMPREF3212_02618 | Not Available | Positive | 2575636 - 2575998 | 13789.4 |
| dna-binding helix-turn-helix protein | HMPREF3212_02619 | Not Available | Positive | 2575985 - 2576284 | 11017.5 |
| purine ribonucleoside efflux pump nepi | HMPREF3212_02620 | Not Available | Positive | 2576403 - 2577596 | 41703.4 |
| putative 6-phospho-beta-glucosidase | HMPREF3212_02621 | Not Available | Negative | 2577646 - 2579028 | 53356.7 |
| hypothetical protein | HMPREF3212_02622 | Not Available | Negative | 2579123 - 2579416 | 10890.0 |
| acetyltransferase, gnat family | HMPREF3212_02623 | Not Available | Positive | 2579547 - 2579963 | 15865.9 |
| sigma-54 interaction domain protein | HMPREF3212_02624 | Not Available | Positive | 2580054 - 2582852 | 104886.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

