Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad dependent oxidoreductase | HMPREF3212_02595 | Not Available | Negative | 2552565 - 2553683 | 41955.4 |
| hypothetical protein | HMPREF3212_02596 | Not Available | Positive | 2553783 - 2555009 | 45543.5 |
| hypothetical protein | HMPREF3212_02597 | Not Available | Negative | 2555011 - 2555346 | 12022.6 |
| small heat shock protein ibpa | HMPREF3212_02598 | Not Available | Positive | 2555648 - 2556061 | 15692.5 |
| small heat shock protein ibpb | HMPREF3212_02599 | Not Available | Positive | 2556154 - 2556582 | 16036.9 |
| trka protein | HMPREF3212_02600 | Not Available | Positive | 2556680 - 2558368 | 59969.1 |
| hypothetical protein | HMPREF3212_02601 | Not Available | Positive | 2558554 - 2558901 | 12759.0 |
| hypothetical protein | HMPREF3212_02602 | Not Available | Positive | 2558891 - 2559253 | 13691.0 |
| hypothetical protein | HMPREF3212_02603 | Not Available | Positive | 2559250 - 2559780 | 20262.4 |
| d-serine ammonia-lyase | HMPREF3212_02604 | Not Available | Negative | 2559783 - 2561105 | 47423.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

