Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_02585 | Not Available | Negative | 2540878 - 2541048 | 5901.33 |
| trna modification gtpase trme | HMPREF3212_02586 | Not Available | Negative | 2541053 - 2542417 | 49138.6 |
| membrane protein insertase, yidc/oxa1 family domain protein | HMPREF3212_02587 | Not Available | Negative | 2542523 - 2544169 | 61577.3 |
| ribonuclease p protein component | HMPREF3212_02588 | Not Available | Negative | 2544393 - 2544719 | 12461.3 |
| ribosomal protein l34 | HMPREF3212_02589 | Not Available | Negative | 2544770 - 2544910 | 5409.74 |
| replication initiator protein dnaa | HMPREF3212_02590 | Not Available | Positive | 2545505 - 2546920 | 53149.6 |
| dna polymerase iii, beta subunit | HMPREF3212_02591 | Not Available | Positive | 2546925 - 2548025 | 40557.0 |
| dna replication and repair protein recf | HMPREF3212_02592 | Not Available | Positive | 2548025 - 2549098 | 40487.3 |
| dna gyrase, b subunit | HMPREF3212_02593 | Not Available | Positive | 2549127 - 2551541 | 89585.6 |
| cof-like hydrolase | HMPREF3212_02594 | Not Available | Positive | 2551748 - 2552560 | 29589.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

