Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein d | HMPREF3212_02437 | Not Available | Positive | 2433447 - 2434319 | 32628.7 |
| hypothetical protein | HMPREF3212_02496 | Not Available | Negative | 2472673 - 2472851 | 6879.89 |
| bacterial transferase hexapeptide repeat protein | HMPREF3212_02497 | Not Available | Positive | 2472879 - 2473433 | 20037.1 |
| hypothetical protein | HMPREF3212_02498 | Not Available | Negative | 2473409 - 2473666 | 9875.57 |
| shikimate dehydrogenase | HMPREF3212_02499 | Not Available | Negative | 2473663 - 2474484 | 29344.1 |
| sua5/ycio/yrdc/ywlc family protein | HMPREF3212_02500 | Not Available | Negative | 2474486 - 2475058 | 20583.6 |
| topoisomerase dna-binding c4 zinc finger domain protein | HMPREF3212_02501 | Not Available | Negative | 2475063 - 2475368 | 11437.7 |
| hypothetical protein | HMPREF3212_02502 | Not Available | Negative | 2475632 - 2476090 | 17847.3 |
| dna protecting protein dpra | HMPREF3212_02503 | Not Available | Negative | 2476077 - 2477201 | 41244.6 |
| peptide deformylase | HMPREF3212_02504 | Not Available | Positive | 2477331 - 2477840 | 19286.4 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

