Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction dna helicase ruvb | HMPREF3212_02417 | Not Available | Positive | 2413104 - 2414114 | 37177.1 |
| high-affinity zinc transporter membrane component | HMPREF3212_02418 | Not Available | Negative | 2414193 - 2414978 | 27731.4 |
| high-affinity zinc transporter atpase | HMPREF3212_02419 | Not Available | Negative | 2414975 - 2415730 | 27762.2 |
| high-affinity zinc transporter periplasmic component | HMPREF3212_02420 | Not Available | Positive | 2415794 - 2416753 | 34748.3 |
| peptidase, m23 family | HMPREF3212_02421 | Not Available | Positive | 2416832 - 2418088 | 46397.2 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | HMPREF3212_02422 | Not Available | Positive | 2418208 - 2419179 | 37337.4 |
| pyruvate kinase | HMPREF3212_02423 | Not Available | Negative | 2419223 - 2420665 | 51451.3 |
| transcriptional regulator, rpir family | HMPREF3212_02424 | Not Available | Negative | 2420784 - 2421677 | 33024.7 |
| glucose-6-phosphate dehydrogenase | HMPREF3212_02425 | Not Available | Positive | 2421979 - 2423496 | 57436.4 |
| phosphogluconate dehydratase | HMPREF3212_02426 | Not Available | Positive | 2423730 - 2425541 | 64633.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

