Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis sigma factor | HMPREF3212_02347 | Not Available | Positive | 2347259 - 2347948 | 26395.5 |
| flagellar regulatory protein fliz | HMPREF3212_02348 | Not Available | Positive | 2348006 - 2348557 | 21726.9 |
| cystine-binding periplasmic protein | HMPREF3212_02349 | Not Available | Positive | 2348637 - 2349458 | 29750.0 |
| d-cysteine desulfhydrase | HMPREF3212_02350 | Not Available | Positive | 2349567 - 2350553 | 35226.5 |
| putative ectoine/hydroxyectoine abc transporter, permease protein ehuc | HMPREF3212_02351 | Not Available | Positive | 2350575 - 2351243 | 24792.8 |
| abc transporter, atp-binding protein | HMPREF3212_02352 | Not Available | Positive | 2351240 - 2351992 | 27771.0 |
| regulatory protein sdia | HMPREF3212_02353 | Not Available | Positive | 2352223 - 2352945 | 27892.5 |
| hypothetical protein | HMPREF3212_02354 | Not Available | Negative | 2353012 - 2353236 | 8205.95 |
| hypothetical protein | HMPREF3212_02355 | Not Available | Positive | 2353352 - 2353501 | 5956.61 |
| response regulator receiver domain protein | HMPREF3212_02356 | Not Available | Positive | 2353696 - 2354352 | 23955.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

