Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-basal body complex protein flie | HMPREF3212_02337 | Not Available | Positive | 2339107 - 2339421 | 11234.7 |
| hypothetical protein | HMPREF3212_02338 | Not Available | Negative | 2339477 - 2339710 | 8639.5 |
| yeee/yede family protein | HMPREF3212_02339 | Not Available | Negative | 2339707 - 2340912 | 44308.2 |
| hypothetical protein | HMPREF3212_02340 | Not Available | Positive | 2341095 - 2341511 | 15178.4 |
| cytoplasmic alpha-amylase | HMPREF3212_02341 | Not Available | Negative | 2341552 - 2343039 | 56465.8 |
| flagellar protein flit | HMPREF3212_02342 | Not Available | Negative | 2343108 - 2343479 | 13947.8 |
| flagellar protein flis | HMPREF3212_02343 | Not Available | Negative | 2343479 - 2343886 | 14581.3 |
| flagellar hook-associated protein 2 | HMPREF3212_02344 | Not Available | Negative | 2343902 - 2345305 | 49564.1 |
| hypothetical protein | HMPREF3212_02345 | Not Available | Positive | 2345322 - 2345456 | 4903.11 |
| flagellin protein | HMPREF3212_02346 | Not Available | Positive | 2345561 - 2347066 | 52831.4 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

