Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | HMPREF3212_02307 | Not Available | Positive | 2315212 - 2316111 | 33640.7 |
| site-specific recombinase, phage integrase family | HMPREF3212_02308 | Not Available | Negative | 2316466 - 2317749 | 48985.1 |
| Trna-asn | Not Available | Not Available | Positive | 2317911 - 2317986 | Not Available |
| protein mtfa | HMPREF3212_02310 | Not Available | Negative | 2318119 - 2318883 | 29297.7 |
| Trna-ser | Not Available | Not Available | Positive | 2318977 - 2319066 | Not Available |
| multidrug efflux protein | HMPREF3212_02312 | Not Available | Positive | 2319570 - 2319902 | 11711.6 |
| putative outer membrane protein | HMPREF3212_02313 | Not Available | Negative | 2320005 - 2321213 | 44361.9 |
| hd domain protein | HMPREF3212_02314 | Not Available | Positive | 2321637 - 2322329 | 26078.1 |
| dna (cytosine-5-)-methyltransferase | HMPREF3212_02315 | Not Available | Positive | 2322406 - 2323836 | 54268.5 |
| dna mismatch endonuclease vsr | HMPREF3212_02316 | Not Available | Positive | 2323817 - 2324284 | 17778.3 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

