Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | HMPREF3212_02297 | Not Available | Negative | 2304348 - 2305508 | 42930.6 |
| ribosomal subunit interface protein | HMPREF3212_02298 | Not Available | Negative | 2305759 - 2306175 | 15846.0 |
| outer membrane assembly lipoprotein yfio | HMPREF3212_02299 | Not Available | Negative | 2306367 - 2307104 | 27785.9 |
| ribosomal large subunit pseudouridine synthase d | HMPREF3212_02300 | Not Available | Positive | 2307236 - 2308216 | 37135.9 |
| hypothetical protein | HMPREF3212_02301 | Not Available | Positive | 2308213 - 2308944 | 26290.2 |
| atp-dependent chaperone protein clpb | HMPREF3212_02302 | Not Available | Positive | 2309062 - 2311647 | 95862.1 |
| hypothetical protein | HMPREF3212_02303 | Not Available | Positive | 2311806 - 2312168 | 14071.2 |
| lysr substrate binding domain protein | HMPREF3212_02304 | Not Available | Negative | 2312231 - 2313127 | 33880.1 |
| transporter, major facilitator family protein | HMPREF3212_02305 | Not Available | Positive | 2313227 - 2314408 | 41064.2 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF3212_02306 | Not Available | Negative | 2314527 - 2315135 | 21678.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

