Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna processing protein rimm | HMPREF3212_02287 | Not Available | Positive | 2297187 - 2297738 | 20604.6 |
| trna (guanine-n(1)-)-methyltransferase | HMPREF3212_02288 | Not Available | Positive | 2297816 - 2298550 | 27230.5 |
| ribosomal protein l19 | HMPREF3212_02289 | Not Available | Positive | 2298590 - 2298937 | 13134.0 |
| ompa family protein | HMPREF3212_02290 | Not Available | Negative | 2299069 - 2299551 | 17452.8 |
| diguanylate cyclase domain protein | HMPREF3212_02291 | Not Available | Negative | 2299564 - 2300706 | 42683.0 |
| hypothetical protein | HMPREF3212_02292 | Not Available | Negative | 2300783 - 2301301 | 19047.2 |
| hypothetical protein | HMPREF3212_02293 | Not Available | Negative | 2301460 - 2301834 | 13882.2 |
| hypothetical protein | HMPREF3212_02295 | Not Available | Negative | 2301892 - 2302050 | 5971.27 |
| 3-deoxy-7-phosphoheptulonate synthase | HMPREF3212_02294 | Not Available | Positive | 2302049 - 2303119 | 38893.3 |
| chorismate mutase | HMPREF3212_02296 | Not Available | Positive | 2303130 - 2304251 | 41935.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

