Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_02220 | Not Available | Negative | 2231276 - 2231404 | 4885.0 |
| bacterial group 1 ig-like protein | HMPREF3212_02221 | Not Available | Negative | 2231553 - 2235095 | 126439.0 |
| hypothetical protein | HMPREF3212_02222 | Not Available | Negative | 2235718 - 2236809 | 42555.5 |
| Tmrna,resume consensus sequence (at 84): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 2270673 - 2271036 | Not Available |
| type i secretion membrane fusion protein, hlyd family | HMPREF3212_02271 | Not Available | Negative | 2271109 - 2272299 | 44059.2 |
| type i secretion system atpase | HMPREF3212_02272 | Not Available | Negative | 2272280 - 2274466 | 80564.4 |
| type i secretion outer membrane protein, tolc family | HMPREF3212_02273 | Not Available | Negative | 2274463 - 2275872 | 51508.9 |
| type 1 secretion target domain protein | HMPREF3212_02274 | Not Available | Negative | 2275973 - 2287168 | 374279.0 |
| ssra-binding protein | HMPREF3212_02275 | Not Available | Negative | 2287752 - 2288234 | 18184.0 |
| polyketide cyclase/dehydrase | HMPREF3212_02276 | Not Available | Positive | 2288377 - 2288832 | 16856.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

