Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | HMPREF3212_02210 | Not Available | Positive | 2214892 - 2216817 | 70510.0 |
| inositol 2-dehydrogenase | HMPREF3212_02211 | Not Available | Positive | 2217162 - 2218148 | 36181.1 |
| sugar-binding domain protein | HMPREF3212_02212 | Not Available | Positive | 2218187 - 2219116 | 32888.5 |
| abc transporter, atp-binding protein | HMPREF3212_02213 | Not Available | Positive | 2219170 - 2220717 | 56339.0 |
| putative ribose abc transporter permease protein | HMPREF3212_02214 | Not Available | Positive | 2220729 - 2221757 | 36407.8 |
| oxidoreductase, nad-binding domain protein | HMPREF3212_02215 | Not Available | Positive | 2221754 - 2222899 | 41786.4 |
| kinase, pfkb family | HMPREF3212_02216 | Not Available | Positive | 2222912 - 2224816 | 69947.6 |
| ap endonuclease, family 2 | HMPREF3212_02217 | Not Available | Positive | 2224792 - 2225721 | 34177.8 |
| putative 5-deoxy-glucuronate isomerase | HMPREF3212_02218 | Not Available | Positive | 2225731 - 2226549 | 30853.3 |
| outer membrane autotransporter barrel domain protein | HMPREF3212_02219 | Not Available | Negative | 2226764 - 2230987 | 147265.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

