Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | HMPREF3212_02190 | Not Available | Negative | 2189055 - 2190071 | 37022.0 |
| hypothetical protein | HMPREF3212_02191 | Not Available | Negative | 2190124 - 2191062 | 36885.4 |
| carbonate dehydratase | HMPREF3212_02192 | Not Available | Negative | 2191278 - 2191913 | 23171.8 |
| hypothetical protein | HMPREF3212_02193 | Not Available | Positive | 2192172 - 2192699 | 18202.4 |
| sigma-54 interaction domain protein | HMPREF3212_02194 | Not Available | Negative | 2192778 - 2194526 | 64977.3 |
| hypothetical protein | HMPREF3212_02195 | Not Available | Negative | 2194607 - 2194744 | 5312.41 |
| diaminopropionate ammonia-lyase | HMPREF3212_02196 | Not Available | Positive | 2194905 - 2196122 | 44046.8 |
| peptidase | HMPREF3212_02197 | Not Available | Positive | 2196155 - 2197339 | 43130.0 |
| amidohydrolase family protein | HMPREF3212_02198 | Not Available | Positive | 2197407 - 2198999 | 58008.9 |
| transporter, major facilitator family protein | HMPREF3212_02199 | Not Available | Positive | 2199078 - 2200364 | 46231.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

