Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase accessory protein hypb | HMPREF3212_02089 | Not Available | Negative | 2095844 - 2096716 | 31376.5 |
| hydrogenase nickel insertion protein hypa | HMPREF3212_02090 | Not Available | Negative | 2096820 - 2097191 | 13843.6 |
| formate hydrogenlyase regulatory protein hyca | HMPREF3212_02091 | Not Available | Positive | 2097390 - 2097848 | 17641.7 |
| hypothetical protein | HMPREF3212_02092 | Not Available | Negative | 2097852 - 2097977 | 4817.76 |
| hydrogenase-4 component a | HMPREF3212_02093 | Not Available | Positive | 2097992 - 2098603 | 21791.4 |
| formate hydrogenlyase subunit 3 | HMPREF3212_02094 | Not Available | Positive | 2098600 - 2100426 | 63844.6 |
| nadh dehydrogenase | HMPREF3212_02095 | Not Available | Positive | 2100429 - 2101352 | 33007.4 |
| respiratory-chain nadh dehydrogenase, subunit | HMPREF3212_02096 | Not Available | Positive | 2101370 - 2103079 | 64997.3 |
| 4fe-4s binding domain protein | HMPREF3212_02097 | Not Available | Positive | 2103089 - 2103631 | 20364.4 |
| nadh ubiquinone oxidoreductase, subunit | HMPREF3212_02098 | Not Available | Positive | 2103631 - 2104398 | 28040.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

