Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gram-negative porin | HMPREF3212_02079 | Not Available | Negative | 2083553 - 2084593 | 39000.6 |
| lyase | HMPREF3212_02080 | Not Available | Positive | 2084999 - 2086369 | 49942.4 |
| transcriptional regulator, rpir family | HMPREF3212_02081 | Not Available | Negative | 2086416 - 2087309 | 33990.7 |
| transporter, anaerobic c4-dicarboxylate uptake c family | HMPREF3212_02082 | Not Available | Positive | 2087663 - 2089030 | 47957.6 |
| putative nad-dependent malic enzyme 3 | HMPREF3212_02083 | Not Available | Positive | 2089083 - 2090777 | 62253.8 |
| hypothetical protein | HMPREF3212_02084 | Not Available | Positive | 2090838 - 2091206 | 14451.8 |
| formate hydrogenlyase transcriptional activator | HMPREF3212_02085 | Not Available | Negative | 2091246 - 2093309 | 77663.6 |
| hydrogenase expression/formation protein hype | HMPREF3212_02086 | Not Available | Negative | 2093452 - 2094462 | 35155.6 |
| hydrogenase expression/formation protein hypd | HMPREF3212_02087 | Not Available | Negative | 2094459 - 2095580 | 41425.7 |
| hydrogenase assembly chaperone hypc/hupf | HMPREF3212_02088 | Not Available | Negative | 2095581 - 2095853 | 9783.68 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

