Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenolic acid decarboxylase subunit b | HMPREF3212_02059 | Not Available | Positive | 2061331 - 2061924 | 21547.3 |
| phenolic acid decarboxylase subunit c | HMPREF3212_02060 | Not Available | Positive | 2061924 - 2063351 | 52485.0 |
| putative phenolic acid decarboxylase subunit d | HMPREF3212_02061 | Not Available | Positive | 2063362 - 2063598 | 9192.06 |
| hok/gef family protein | HMPREF3212_02062 | Not Available | Positive | 2063902 - 2064090 | 6981.78 |
| dna mismatch repair protein muts | HMPREF3212_02063 | Not Available | Negative | 2064200 - 2066821 | 97469.2 |
| hypothetical protein | HMPREF3212_02064 | Not Available | Positive | 2066914 - 2067057 | 5056.19 |
| hypothetical protein | HMPREF3212_02065 | Not Available | Negative | 2067140 - 2068141 | 36463.2 |
| rnd transporter, hae1/hme family, permease protein | HMPREF3212_02066 | Not Available | Negative | 2068206 - 2071259 | 111399.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF3212_02067 | Not Available | Negative | 2071259 - 2072344 | 39935.9 |
| hypothetical protein | HMPREF3212_02068 | Not Available | Negative | 2072872 - 2073351 | 18188.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

