Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_02049 | Not Available | Positive | 2054104 - 2054313 | 7460.32 |
| cell division protein ftsb | HMPREF3212_02050 | Not Available | Positive | 2054335 - 2054646 | 11594.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | HMPREF3212_02051 | Not Available | Positive | 2054665 - 2055360 | 25028.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | HMPREF3212_02052 | Not Available | Positive | 2055416 - 2055895 | 16868.6 |
| trna pseudouridine synthase d | HMPREF3212_02053 | Not Available | Positive | 2055892 - 2056941 | 39301.6 |
| 5'/3'-nucleotidase sure | HMPREF3212_02054 | Not Available | Positive | 2056922 - 2057683 | 27151.1 |
| protein-l-isoaspartate o-methyltransferase | HMPREF3212_02055 | Not Available | Positive | 2057677 - 2058303 | 23372.5 |
| lipoprotein nlpd | HMPREF3212_02056 | Not Available | Positive | 2058593 - 2059570 | 34491.5 |
| rna polymerase sigma factor rpos | HMPREF3212_02057 | Not Available | Positive | 2059633 - 2060625 | 37934.9 |
| transcriptional regulator, marr family | HMPREF3212_02058 | Not Available | Negative | 2060768 - 2061247 | 18521.4 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

