Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| queuine synthase | HMPREF3212_02018 | Not Available | Negative | 2020379 - 2021227 | 32497.0 |
| syd protein | HMPREF3212_02019 | Not Available | Positive | 2021296 - 2021841 | 20378.2 |
| hypothetical protein | HMPREF3212_02021 | Not Available | Positive | 2022475 - 2022804 | 12688.1 |
| rna pseudouridine synthase | HMPREF3212_02022 | Not Available | Positive | 2022804 - 2023586 | 29867.7 |
| flavodoxin | HMPREF3212_02023 | Not Available | Positive | 2023606 - 2024055 | 16320.1 |
| putative glucarate transporter | HMPREF3212_02024 | Not Available | Positive | 2024398 - 2025750 | 48928.6 |
| glucarate dehydratase protein | HMPREF3212_02025 | Not Available | Positive | 2025747 - 2027093 | 48981.5 |
| glucarate dehydratase | HMPREF3212_02026 | Not Available | Positive | 2027150 - 2028454 | 47864.4 |
| glycerate kinase | HMPREF3212_02027 | Not Available | Positive | 2028536 - 2029678 | 39339.0 |
| signal transduction histidine-protein kinase bara | HMPREF3212_02028 | Not Available | Negative | 2029722 - 2032157 | 90155.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

