Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar-binding domain protein | HMPREF3212_02008 | Not Available | Positive | 2009018 - 2009968 | 33519.2 |
| fggy-family pentulose kinase | HMPREF3212_02009 | Not Available | Positive | 2010022 - 2011602 | 56826.6 |
| d-fructose-responsive transcription factor | HMPREF3212_02010 | Not Available | Positive | 2011669 - 2012667 | 37477.9 |
| l-fuculose phosphate aldolase | HMPREF3212_02011 | Not Available | Positive | 2012809 - 2013456 | 23881.8 |
| lactaldehyde reductase | HMPREF3212_02012 | Not Available | Positive | 2013484 - 2014632 | 40514.7 |
| 5'-3' exonuclease, sam domain protein | HMPREF3212_02013 | Not Available | Negative | 2014709 - 2015464 | 28238.8 |
| l-serine ammonia-lyase | HMPREF3212_02014 | Not Available | Negative | 2015631 - 2016998 | 48807.9 |
| serine transporter | HMPREF3212_02015 | Not Available | Negative | 2017052 - 2018341 | 46892.2 |
| hypothetical protein | HMPREF3212_02016 | Not Available | Positive | 2018739 - 2018879 | 5297.45 |
| putative lysine decarboxylase | HMPREF3212_02017 | Not Available | Negative | 2018902 - 2020236 | 49853.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

