Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional activator | HMPREF3212_01998 | Not Available | Positive | 1999007 - 1999924 | 34366.4 |
| hypothetical protein | HMPREF3212_01999 | Not Available | Positive | 1999943 - 2000338 | 14440.1 |
| putative rna 2'-o-ribose methyltransferase ygde | HMPREF3212_02000 | Not Available | Positive | 2000331 - 2001431 | 41903.6 |
| transcriptional regulator, deor family | HMPREF3212_02001 | Not Available | Negative | 2001467 - 2002240 | 28936.4 |
| l-fucose mutarotase | HMPREF3212_02002 | Not Available | Negative | 2002253 - 2002675 | 15349.8 |
| l-fuculokinase | HMPREF3212_02003 | Not Available | Negative | 2002677 - 2004095 | 52029.1 |
| arabinose isomerase | HMPREF3212_02004 | Not Available | Negative | 2004218 - 2005993 | 65026.4 |
| hypothetical protein | HMPREF3212_02005 | Not Available | Negative | 2006223 - 2006423 | 7455.2 |
| putative ribose transport atp-binding protein rbsa | HMPREF3212_02006 | Not Available | Positive | 2006458 - 2007957 | 55202.9 |
| putative ribose abc transporter permease protein | HMPREF3212_02007 | Not Available | Positive | 2007961 - 2008944 | 34526.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

