Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | HMPREF3212_01977 | Not Available | Positive | 1984069 - 1985265 | 43613.7 |
| fimbrial protein | HMPREF3212_01978 | Not Available | Positive | 1985606 - 1986208 | 20496.1 |
| fimbrial protein | HMPREF3212_01979 | Not Available | Positive | 1986219 - 1986827 | 21745.7 |
| hypothetical protein | HMPREF3212_01980 | Not Available | Positive | 1986820 - 1987386 | 20430.1 |
| hypothetical protein | HMPREF3212_01981 | Not Available | Positive | 1987399 - 1987995 | 21498.3 |
| gram-negative pili assembly chaperone domain protein | HMPREF3212_01982 | Not Available | Positive | 1988114 - 1988746 | 23253.1 |
| fimbrial usher protein | HMPREF3212_01983 | Not Available | Positive | 1988842 - 1991454 | 93464.9 |
| fimbrial protein | HMPREF3212_01984 | Not Available | Positive | 1991559 - 1992047 | 17766.2 |
| fimbrial protein | HMPREF3212_01985 | Not Available | Positive | 1992063 - 1992647 | 20590.4 |
| hypothetical protein | HMPREF3212_01986 | Not Available | Positive | 1992660 - 1993703 | 36737.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

