Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type cleavage/methylation protein | HMPREF3212_01967 | Not Available | Positive | 1968772 - 1969242 | 17717.3 |
| prepilin-type cleavage/methylation protein | HMPREF3212_01968 | Not Available | Positive | 1969233 - 1969796 | 20656.8 |
| hypothetical protein | HMPREF3212_01969 | Not Available | Positive | 1969826 - 1970200 | 13849.8 |
| prepilin-type cleavage/methylation protein | HMPREF3212_01970 | Not Available | Positive | 1970185 - 1970508 | 12425.3 |
| exodeoxyribonuclease v, gamma subunit | HMPREF3212_01971 | Not Available | Positive | 1970521 - 1973889 | 129132.0 |
| protease 3 | HMPREF3212_01972 | Not Available | Positive | 1974069 - 1976957 | 107543.0 |
| exodeoxyribonuclease v, beta subunit | HMPREF3212_01973 | Not Available | Positive | 1976950 - 1980495 | 133327.0 |
| exodeoxyribonuclease v, alpha subunit | HMPREF3212_01974 | Not Available | Positive | 1980492 - 1982321 | 66282.5 |
| amino-acid n-acetyltransferase | HMPREF3212_01975 | Not Available | Negative | 1982446 - 1983537 | 40470.7 |
| hypothetical protein | HMPREF3212_01976 | Not Available | Positive | 1983544 - 1983807 | 9785.69 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

