Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acetyltransferase | HMPREF3212_01945 | Not Available | Positive | 1945499 - 1946677 | 41327.6 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | HMPREF3212_01946 | Not Available | Positive | 1947149 - 1947985 | 31130.3 |
| 2-deoxy-d-gluconate 3-dehydrogenase | HMPREF3212_01947 | Not Available | Positive | 1948043 - 1948804 | 27099.6 |
| arabinose-proton symporter | HMPREF3212_01948 | Not Available | Positive | 1949087 - 1950538 | 53136.5 |
| cupin domain protein | HMPREF3212_01949 | Not Available | Negative | 1950612 - 1950938 | 12178.6 |
| aspartate racemase | HMPREF3212_01950 | Not Available | Positive | 1951005 - 1951787 | 28616.3 |
| transcriptional activator protein lysr | HMPREF3212_01952 | Not Available | Negative | 1951759 - 1952814 | 39493.2 |
| diaminopimelate decarboxylase | HMPREF3212_01951 | Not Available | Positive | 1952813 - 1954069 | 45900.0 |
| putative hth-type transcriptional regulator ascg | HMPREF3212_01953 | Not Available | Negative | 1954177 - 1955187 | 37208.6 |
| hth-type transcriptional regulator galr | HMPREF3212_01954 | Not Available | Negative | 1955201 - 1956229 | 37003.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

