Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial fdra protein | HMPREF3212_01935 | Not Available | Positive | 1934187 - 1935734 | 55379.9 |
| hypothetical protein | HMPREF3212_01936 | Not Available | Positive | 1935734 - 1937152 | 50917.6 |
| putative permease | HMPREF3212_01937 | Not Available | Positive | 1937270 - 1938820 | 55130.0 |
| putative carbamate kinase | HMPREF3212_01938 | Not Available | Positive | 1938847 - 1939797 | 33893.7 |
| putative deaminase | HMPREF3212_01939 | Not Available | Positive | 1939810 - 1941192 | 50444.6 |
| transporter, ni2+-co2+ transporter family protein | HMPREF3212_01940 | Not Available | Negative | 1941237 - 1942136 | 32920.7 |
| transcriptional repressor rcnr | HMPREF3212_01941 | Not Available | Positive | 1942257 - 1942529 | 10123.4 |
| serine transporter | HMPREF3212_01942 | Not Available | Negative | 1942583 - 1943812 | 44890.6 |
| bacterial transmembrane pair family protein | HMPREF3212_01943 | Not Available | Negative | 1943955 - 1944410 | 17471.6 |
| lysr substrate binding domain protein | HMPREF3212_01944 | Not Available | Positive | 1944512 - 1945396 | 32789.3 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

