Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system, toxin component, gnat family | HMPREF3212_01925 | Not Available | Negative | 1923049 - 1923585 | 20001.1 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | HMPREF3212_01926 | Not Available | Positive | 1924486 - 1926864 | 88867.3 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | HMPREF3212_01927 | Not Available | Positive | 1926874 - 1928895 | 76695.7 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | HMPREF3212_01928 | Not Available | Positive | 1928892 - 1930226 | 50888.8 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | HMPREF3212_01929 | Not Available | Positive | 1930223 - 1930729 | 19520.9 |
| hypothetical protein | HMPREF3212_01930 | Not Available | Positive | 1930812 - 1931042 | 8622.4 |
| acetyltransferase, gnat family | HMPREF3212_01931 | Not Available | Positive | 1931039 - 1931326 | 10638.7 |
| putative hth-type transcriptional activator alls | HMPREF3212_01932 | Not Available | Negative | 1931369 - 1932298 | 34825.1 |
| ankyrin repeat protein | HMPREF3212_01933 | Not Available | Positive | 1932596 - 1933294 | 25524.1 |
| hypothetical protein | HMPREF3212_01934 | Not Available | Positive | 1933421 - 1934209 | 29271.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

