Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_01864 | Not Available | Negative | 1865026 - 1865193 | 6562.94 |
| hypothetical protein | HMPREF3212_01865 | Not Available | Negative | 1865203 - 1865355 | 5335.21 |
| hypothetical protein | HMPREF3212_01866 | Not Available | Positive | 1865524 - 1865655 | 4979.43 |
| arginine 2-monooxygenase | HMPREF3212_01867 | Not Available | Positive | 1865727 - 1867640 | 71740.0 |
| agmatinase | HMPREF3212_01868 | Not Available | Positive | 1867878 - 1868798 | 33577.9 |
| peptidase, m48 family | HMPREF3212_01869 | Not Available | Negative | 1868995 - 1869924 | 32834.3 |
| transketolase | HMPREF3212_01870 | Not Available | Positive | 1870033 - 1872024 | 71974.3 |
| hypothetical protein | HMPREF3212_01871 | Not Available | Positive | 1872207 - 1872329 | 4882.24 |
| phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 | HMPREF3212_01872 | Not Available | Positive | 1872339 - 1872782 | 15918.1 |
| eiicb-mtl | HMPREF3212_01873 | Not Available | Positive | 1872810 - 1874189 | 48889.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

