Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate enzyme, yggs family | HMPREF3212_01854 | Not Available | Negative | 1855989 - 1856693 | 25635.7 |
| twitching motility protein | HMPREF3212_01855 | Not Available | Positive | 1856711 - 1857691 | 35942.2 |
| rnase h domain protein, yqgf family | HMPREF3212_01856 | Not Available | Negative | 1857688 - 1858107 | 15331.4 |
| putative acr | HMPREF3212_01857 | Not Available | Negative | 1858104 - 1858739 | 23426.5 |
| glutathione synthase | HMPREF3212_01858 | Not Available | Negative | 1858779 - 1859726 | 35437.9 |
| 16s rrna methyltransferase rsme | HMPREF3212_01859 | Not Available | Negative | 1859746 - 1860378 | 23267.2 |
| endonuclease-1 | HMPREF3212_01860 | Not Available | Negative | 1860551 - 1861303 | 28472.5 |
| metallopeptidase, sprt family | HMPREF3212_01861 | Not Available | Negative | 1861353 - 1861850 | 19390.7 |
| galactose-proton symporter | HMPREF3212_01862 | Not Available | Negative | 1861928 - 1863322 | 50933.6 |
| methionine adenosyltransferase | HMPREF3212_01863 | Not Available | Negative | 1863722 - 1864876 | 41902.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

